Monday, March 5, 2012

Course Syllabus: TU M.Sc Microbiology First year:Practical Course on (MB511+MB 512)


Practical I
Course Title: Practical Course on (MB511+MB 512) Full Marks: 50
Course No: MB516 Pass Marks: 20
Nature of course: Practical Year: I

Objectives

Upon the completion of the course, students will have
  • practical skills on handling, isolation, identification and enumeration of bacteria, yeast and molds.
  • advanced practical skills on molecular techniques to study microbial genetics.
  • advanced practical skills on immunological and serological techniques.

I. Microbial Structure, Physiology and Genetics

Bacterial Morphology
  • Microscopy and Staining

Microbial Physiology

  • Measurement of growth of bacteria
  • Enumeration techniques
  • Biomass determination
  • Determination of bacterial growth curve in broth medium
  • Effect of environmental factors on bacterial growth
  • Temperature, pH, UV radiation, nutrients, water activity, gaseous requirements
  • Degradation experiments
  • Cellulose, Starch, Gelatin, Casein, Tween 80
  • To study inhibitory effect of lysozyme and detergents on bacterial cell wall
  • Conventional biochemical testing for identification of enterobacteriaceae family
  • Biochemical identification of unknown bacteria (Gram positive, gram negative)
  • Antimicrobial Susceptibility Test


Yeast, Mold and Actinomyctes

  • Isolation, enumeration and morphological identification of yeast and molds
  • Growth of molds in different condition
  • Isolation and characterization of Actinomycetes

Viruses

  • Isolation and enumeration of bacteriophage
  • One step growth curve of bacteriophage

Typing of bacteria

  • Phage typing
  • Antibiogram typing

II. Microbial Genetics

  • Nucleus staining (Prokaryotic and Eukaryotic cells)
  • Nucleic acid Extraction
  • Extraction and purification of chromosomal and plasmid DNA from bacteria
  • Extraction and purification of DNA from yeast cells
  • Extraction and purification of RNA from Prokaryotic and Eukaryotic cells

  • Determination of molecular weight of DNA (Agarose Gel Electrophoresis)

  • DNA Transfer/Recombination/Expression

  • Transformation experiment
  • Conjugation experiment
  • Mutation

  • Generation, detection and isolation of mutants

  • Molecular Techniques

  • Plasmid Profiling

  • PCR

  • Blotting

     

     III. Immunology

  • Handling of laboratory animals

  • Animal inoculation Techniques using different routes

  • Preparation of Antigen for animal inoculation

  • Harvesting of antisera and purification of immunoglobulins
  • Serological techniques
  • Precipitation (Gel: Single and Ouchterlony double diffusion)
  • Agglutination (Slide, Tube, Latex and Haemagglutination)
  • Neutralization test
  • ELISA
  • Immunoelectrophoresis
  • Immunoflourescence technique
  • Immunochromatographic technique
  • Complement Fixation test
  • Hypersensitivity Reactions (Montoux test, Allergy test)
  • Serotyping (E. coli, Salmonella, Vibrio)

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